Transcript: lnc-ODF3L2-2:3

Basic information

LNCipedia transcript ID: lnc-ODF3L2-2:3 
LNCipedia gene ID: lnc-ODF3L2-2
Ensembl Gene ID: ENSG00000266933
Ensembl Transcript ID: ENST00000592413
Location (hg38): chr19:490046-507833
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 850 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000592413.2
Alternative gene names: ENSG00000266933.2; AC005775.2; AC005775.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -151.7652 non-coding 
CPAT coding probability 1.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ODF3L2-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ODF3L2-2:3
4.1 lnc-ODF3L2-2:3
5.0 lnc-ODF3L2-2:3
5.1 lnc-ZNF77-153:6
5.2 lnc-ODF3L2-2:3