Transcript: lnc-OIP5-3:1

Basic information

LNCipedia transcript ID: lnc-OIP5-3:1 
LNCipedia gene ID: lnc-OIP5-3
Location (hg38): chr15:41282489-41283782
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1294 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000024710.1|ENCT00000147820.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.2621 non-coding 
CPAT coding probability 0.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OIP5-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-OIP5-3:1
5.0 lnc-OIP5-3:1
5.1 lnc-VPS39-20:1
5.2 lnc-OIP5-3:1