Transcript: lnc-ONECUT3-3:1

Basic information

LNCipedia transcript ID: lnc-ONECUT3-3:1 
LNCipedia gene ID: lnc-ONECUT3-3
Ensembl Gene ID: ENSG00000267007
Ensembl Transcript ID: ENST00000586259
Location (hg38): chr19:1815249-1815873
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 447 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT060360; ENST00000586259.1
Alternative gene names: ENSG00000267007.1; CTB-31O20.3; AC012615.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ONECUT3-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ONECUT3-3:1
4.0 lnc-ONECUT3-3:1
4.1 lnc-ONECUT3-3:1
5.0 lnc-ONECUT3-3:1
5.1 lnc-RPL36-119:1
5.2 lnc-ONECUT3-3:1