Transcript: lnc-OPCML-3:12

Basic information

LNCipedia transcript ID: lnc-OPCML-3:12 
LNCipedia gene ID: lnc-OPCML-3
Location (hg38): chr11:131902060-131911136
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1646 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000238117.1|MICT00000070655.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -39.2532 non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OPCML-3:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C11orf39-3:6
5.0 lnc-C11orf39-3:6
5.1 lnc-OPCML-3:2
5.2 lnc-OPCML-3:12