Transcript: lnc-OPCML-3:19

Basic information

LNCipedia transcript ID: lnc-OPCML-3:19 
LNCipedia gene ID: lnc-OPCML-3
Location (hg38): chr11:131890216-131897327
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 7112 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000238117.1|ENCT00000084802.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -81.2317 non-coding 
CPAT coding probability 1.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OPCML-3:19 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C11orf39-3:8
5.0 lnc-C11orf39-3:8
5.1 lnc-OPCML-3:9
5.2 lnc-OPCML-3:19