Transcript: lnc-OR10K2-1:2

Basic information

LNCipedia transcript ID: lnc-OR10K2-1:2 
LNCipedia gene ID: lnc-OR10K2-1
Location (hg38): chr1:158474454-158494886
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2597 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236656.1|ENST00000419738.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 115.9068 coding 
CPAT coding probability 0.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-OR10K2-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-OR6Y1-1:3
5.0 lnc-OR6Y1-1:3
5.1 lnc-TAGLN2-18:2
5.2 lnc-OR10K2-1:2