Transcript: lnc-OR14J1-2:3

Basic information

LNCipedia transcript ID: lnc-OR14J1-2:3 
LNCipedia gene ID: lnc-OR14J1-2
Location (hg38): chr6:29224000-29290440
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 367 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016
Alternative transcript names: ENST00000606648.1
Alternative gene names: ENSG00000232505.2; XXbac-BPG308J9.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -165.6722 non-coding 
CPAT coding probability 7.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR14J1-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OR14J1-2:3
4.0 lnc-OR14J1-2:3
4.1 lnc-OR14J1-2:3
5.0 lnc-OR14J1-2:3
5.1 lnc-OR2I1P-12:4
5.2 lnc-OR14J1-2:3