Transcript: lnc-OR4F17-4:4

Basic information

LNCipedia transcript ID: lnc-OR4F17-4:4 
LNCipedia gene ID: lnc-OR4F17-4
Ensembl Gene ID: ENSG00000282807
Ensembl Transcript ID: ENST00000633603
Location (hg38): chr19:71778-72718
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 631 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000633603.1
Alternative gene names: ENSG00000282807.1; AC008993.3; ENSG00000282807.2; MIR1302-11; ENSG00000282807.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -22.5593 non-coding 
CPAT coding probability 1.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR4F17-4:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-OR4F17-4:4
4.1 lnc-OR4F17-4:4
5.0 lnc-OR4F17-4:4
5.1 lnc-RPL36-195:3
5.2 lnc-OR4F17-4:4