Transcript: lnc-OR4F17-6:1

Basic information

LNCipedia transcript ID: lnc-OR4F17-6:1 
LNCipedia gene ID: lnc-OR4F17-6
Location (hg38): chr19:176907-177913
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1007 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT060111; ENST00000588418.1
Alternative gene names: ENSG00000267290.1; AC092192.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.3722 non-coding 
CPAT coding probability 23.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR4F17-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OR4F17-6:1
4.0 lnc-OR4F17-6:1
4.1 lnc-OR4F17-6:1
5.0 lnc-OR4F17-6:1
5.1 lnc-RPL36-191:2
5.2 lnc-OR4F17-6:1