Transcript: lnc-OR4F21-4:4

Basic information

LNCipedia transcript ID: lnc-OR4F21-4:4 
LNCipedia gene ID: lnc-OR4F21-4
Location (hg38): chr8:267246-274371
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5480 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000101370.1|ENCT00000431647.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.2415 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR4F21-4:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-63E5.6.1-3:2
5.0 lnc-RP11-63E5.6.1-3:2
5.1 lnc-DEFA1B-93:4
5.2 lnc-OR4F21-4:4