Transcript: lnc-OR4F21-4:6

Basic information

LNCipedia transcript ID: lnc-OR4F21-4:6 
LNCipedia gene ID: lnc-OR4F21-4
Location (hg38): chr8:261375-274332
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 504 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000101370.1|FTMT22900013534.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -68.2954 non-coding 
CPAT coding probability 1.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR4F21-4:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-63E5.6.1-3:8
5.0 lnc-RP11-63E5.6.1-3:8
5.1 lnc-DEFA1B-93:6
5.2 lnc-OR4F21-4:6