Transcript: lnc-OR4F29-1:4

Basic information

LNCipedia transcript ID: lnc-OR4F29-1:4 
LNCipedia gene ID: lnc-OR4F29-1
Location (hg38): chr1:494594-497300
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 555 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000440038.1; RP4-669L17.10-003; OTTHUMT00000346880.1
Alternative gene names: ENSG00000237094.3; RP4-669L17.10; OTTHUMG00000156968.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 8.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR4F29-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OR4F29-1:4
4.0 lnc-OR4F29-1:4
4.1 lnc-OR4F29-1:4
5.0 lnc-OR4F29-1:4
5.1 lnc-CLSTN1-177:12
5.2 lnc-OR4F29-1:4