Transcript: lnc-OR4F3-5:10

Basic information

LNCipedia transcript ID: lnc-OR4F3-5:10 
LNCipedia gene ID: lnc-OR4F3-5
Location (hg38): chr5:181323506-181328195
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4273 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT105954; NR_028327
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 93.1427 coding 
CPAT coding probability 99.86% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-OR4F3-5:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC138035.1-2:5
4.0 lnc-AC138035.1-2:5
4.1 lnc-AC138035.1-2:5
5.0 lnc-AC138035.1-2:5
5.1 lnc-SQSTM1-32:10
5.2 lnc-OR4F3-5:10