Transcript: lnc-OR4F3-5:11

Basic information

LNCipedia transcript ID: lnc-OR4F3-5:11 
LNCipedia gene ID: lnc-OR4F3-5
Location (hg38): chr5:181324370-181328067
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2661 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT105955; ENST00000457364.2
Alternative gene names: ENSG00000238035.4; AC138035.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 99.1586 coding 
CPAT coding probability 96.66% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-OR4F3-5:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC138035.1-2:6
4.0 lnc-AC138035.1-2:6
4.1 lnc-AC138035.1-2:6
5.0 lnc-AC138035.1-2:6
5.1 lnc-SQSTM1-32:11
5.2 lnc-OR4F3-5:11