Transcript: lnc-OR4F3-5:2

Basic information

LNCipedia transcript ID: lnc-OR4F3-5:2 
LNCipedia gene ID: lnc-OR4F3-5
Location (hg38): chr5:181281366-181283652
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 558 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000248103.1|ENST00000412295.2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.296 non-coding 
CPAT coding probability 1.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR4F3-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AC138035.1-2:10
5.0 lnc-AC138035.1-2:10
5.1 lnc-SQSTM1-32:2
5.2 lnc-OR4F3-5:2