Transcript: lnc-OR4F3-5:4

Basic information

LNCipedia transcript ID: lnc-OR4F3-5:4 
LNCipedia gene ID: lnc-OR4F3-5
Location (hg38): chr5:181281366-181325468
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3170 bp
Exons: 10
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000248103.1|FTMT21900050083.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 64.5509 coding 
CPAT coding probability 99.68% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-OR4F3-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AC138035.1-2:12
5.0 lnc-AC138035.1-2:12
5.1 lnc-SQSTM1-32:4
5.2 lnc-OR4F3-5:4