Transcript: lnc-OR4N2-8:3

Basic information

LNCipedia transcript ID: lnc-OR4N2-8:3 
LNCipedia gene ID: lnc-OR4N2-8
Ensembl Gene ID: ENSG00000273639
Ensembl Transcript ID: ENST00000548217
Location (hg38): chr14:19499737-19677836
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 549 bp
Exons: 7
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000548217.5
Alternative gene names: ENSG00000273639.4; RP11-597A11.11; ENSG00000273639.5; AL512310.12; ENSG00000273639.6; AL512310.11


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 8.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-OR4N2-8:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-OR4K15-15:2
5.1 lnc-OR4K15-15:2
5.2 lnc-OR4N2-8:3