Transcript: lnc-OR4N4-1:19

Basic information

LNCipedia transcript ID: lnc-OR4N4-1:19 
LNCipedia gene ID: lnc-OR4N4-1
Location (hg38): chr15:22058732-22059893
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 436 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT140183; FPKM1_group_9741_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -62.5911 non-coding 
CPAT coding probability 2.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR4N4-1:19 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OR4N4-1:19
4.0 lnc-OR4N4-1:19
4.1 lnc-OR4N4-1:19
5.0 lnc-OR4N4-1:19
5.1 lnc-SNRPN-57:20
5.2 lnc-OR4N4-1:19