Transcript: lnc-OR5A2-2:1

Basic information

LNCipedia transcript ID: lnc-OR5A2-2:1 
LNCipedia gene ID: lnc-OR5A2-2
Location (hg38): chr11:59316878-59321709
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2500 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_478_chr11:59084350-59086817_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.9484 non-coding 
CPAT coding probability 9.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR5A2-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OR5A2-2:1
4.0 lnc-OR5A2-2:1
4.1 lnc-OR5A2-2:1
5.0 lnc-OR5A2-2:1
5.1 lnc-OR5M11-38:1
5.2 lnc-OR5A2-2:1