Transcript: lnc-ORAOV1-1:4

Basic information

LNCipedia transcript ID: lnc-ORAOV1-1:4 
LNCipedia gene ID: lnc-ORAOV1-1
Location (hg38): chr11:69475631-69476784
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1102 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020094; NONHSAT022606
Alternative gene names: XLOC_009485; linc-MRGPRF-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -56.2503 non-coding 
CPAT coding probability 74.81% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ORAOV1-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ORAOV1-2:1
3.1 lnc-ORAOV1-2:1
4.0 lnc-ORAOV1-2:1
4.1 lnc-ORAOV1-1:4
5.0 lnc-ORAOV1-1:4
5.1 lnc-KMT5B-23:5
5.2 lnc-ORAOV1-1:4