Transcript: lnc-ORAOV1-3:2

Basic information

LNCipedia transcript ID: lnc-ORAOV1-3:2 
LNCipedia gene ID: lnc-ORAOV1-3
Location (hg38): chr11:69416816-69444966
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5603 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000255606.1|MICT00000062686.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -7.4387 non-coding 
CPAT coding probability 21.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ORAOV1-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ORAOV1-3:2
5.0 lnc-ORAOV1-3:2
5.1 lnc-KMT5B-22:1
5.2 lnc-ORAOV1-3:2