Transcript: lnc-ORC3-4:1

Basic information

LNCipedia transcript ID: lnc-ORC3-4:1 
LNCipedia gene ID: lnc-ORC3-4
Location (hg38): chr6:87742080-87742339
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 260 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT113917; FPKM1_group_27966_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -259.8726 non-coding 
CPAT coding probability 2.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ORC3-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ORC3-4:1
4.0 lnc-ORC3-4:1
4.1 lnc-ORC3-4:1
5.0 lnc-ORC3-4:1
5.1 lnc-ZNF292-15:1
5.2 lnc-ORC3-4:1