Transcript: lnc-ORC3-6:2

Basic information

LNCipedia transcript ID: lnc-ORC3-6:2 
LNCipedia gene ID: lnc-ORC3-6
RefSeq ID: NR_110869
Location (hg38): chr6:87784860-87911731
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 593 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110869; NR_110869.1
Alternative gene names: LOC101928911


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -131.5153 non-coding 
CPAT coding probability 1.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ORC3-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ORC3-6:2
4.0 lnc-ORC3-6:2
4.1 lnc-ORC3-6:2
5.0 lnc-ORC3-6:2
5.1 lnc-ZNF292-18:2
5.2 lnc-ORC3-6:2