Transcript: lnc-OSBP-1:2

Basic information

LNCipedia transcript ID: lnc-OSBP-1:2 
LNCipedia gene ID: lnc-OSBP-1
Ensembl Gene ID: ENSG00000255008
Ensembl Transcript ID: ENST00000533552
Location (hg38): chr11:59561146-59566074
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 769 bp
Exons: 6
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000533552.2
Alternative gene names: ENSG00000255008.2; AP000442.4; AP000442.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.1561 non-coding 
CPAT coding probability 73.95% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-OSBP-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OSBP-1:2
4.0 lnc-OSBP-1:2
4.1 lnc-OSBP-1:2
5.0 lnc-OSBP-1:2
5.1 lnc-OR5M11-40:5
5.2 lnc-OSBP-1:2