Transcript: lnc-OSBPL7-3:21

Basic information

LNCipedia transcript ID: lnc-OSBPL7-3:21 
LNCipedia gene ID: lnc-OSBPL7-3
Ensembl Gene ID: ENSG00000263766
Ensembl Transcript ID: ENST00000582066
Location (hg38): chr17:47603864-47636550
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 294 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000582066.1; RP11-580I16.2-004; OTTHUMT00000441344.1; NONHSAT054316
Alternative gene names: ENSG00000263766.1; RP11-580I16.2; OTTHUMG00000178284.1; ENSG00000263766.5; AC025682.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 249.8382 coding 
CPAT coding probability 2.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-OSBPL7-3:21 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC040934.1-3:4
4.0 lnc-AC040934.1-3:4
4.1 lnc-AC040934.1-3:4
5.0 lnc-AC040934.1-3:4
5.1 lnc-ZNF652-49:21
5.2 lnc-OSBPL7-3:21