Transcript: lnc-OST4-6:2

Basic information

LNCipedia transcript ID: lnc-OST4-6:2 
LNCipedia gene ID: lnc-OST4-6
Location (hg38): chr2:27019031-27032874
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 13231 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000047962.1|ENCT00000240237.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 239.2378 coding 
CPAT coding probability 1.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-OST4-6:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-OST4-6:2
5.0 lnc-OST4-6:2
5.1 lnc-RBKS-37:1
5.2 lnc-OST4-6:2