Transcript: lnc-OTOGL-1:11

Basic information

LNCipedia transcript ID: lnc-OTOGL-1:11 
LNCipedia gene ID: lnc-OTOGL-1
Location (hg38): chr12:79935255-79944070
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4009 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000257557.1|ENCT00000093623.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.2898 non-coding 
CPAT coding probability 3.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OTOGL-1:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-OTOGL-1:11
5.0 lnc-OTOGL-1:11
5.1 lnc-SYT1-53:5
5.2 lnc-OTOGL-1:11