Transcript: lnc-OTOP1-6:11

Basic information

LNCipedia transcript ID: lnc-OTOP1-6:11 
LNCipedia gene ID: lnc-OTOP1-6
Location (hg38): chr4:3915187-3924274
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 530 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT094901
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 24.4688 non-coding 
CPAT coding probability 26.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OTOP1-6:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OTOP1-6:11
4.0 lnc-OTOP1-6:11
4.1 lnc-OTOP1-6:11
5.0 lnc-OTOP1-6:11
5.1 lnc-PSAPL1-37:11
5.2 lnc-OTOP1-6:11