Transcript: lnc-OXCT1-1:10

Basic information

LNCipedia transcript ID: lnc-OXCT1-1:10 
LNCipedia gene ID: lnc-OXCT1-1
Location (hg38): chr5:42154307-42168576
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3356 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00010315; NONHSAT101196
Alternative gene names: XLOC_004800; linc-OXCT1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.6208 non-coding 
CPAT coding probability 0.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OXCT1-1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-OXCT1-1:10
3.1 lnc-OXCT1-1:10
4.0 lnc-OXCT1-1:10
4.1 lnc-OXCT1-1:10
5.0 lnc-OXCT1-1:10
5.1 lnc-SELENOP-22:12
5.2 lnc-OXCT1-1:10