Transcript: lnc-OXCT1-1:11

Basic information

LNCipedia transcript ID: lnc-OXCT1-1:11 
LNCipedia gene ID: lnc-OXCT1-1
Location (hg38): chr5:42152941-42157438
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1231 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00010920; NONHSAT101192
Alternative gene names: XLOC_004800; linc-OXCT1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -150.0789 non-coding 
CPAT coding probability 0.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OXCT1-1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-OXCT1-1:11
3.1 lnc-OXCT1-1:11
4.0 lnc-OXCT1-1:11
4.1 lnc-OXCT1-1:11
5.0 lnc-OXCT1-1:11
5.1 lnc-SELENOP-22:13
5.2 lnc-OXCT1-1:11