Transcript: lnc-OXCT1-1:13

Basic information

LNCipedia transcript ID: lnc-OXCT1-1:13 
LNCipedia gene ID: lnc-OXCT1-1
RefSeq ID: NR_104635
Location (hg38): chr5:42155833-42175345
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2007 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_104635; NR_104635.1
Alternative gene names: LOC101926960


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -25.1638 non-coding 
CPAT coding probability 0.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OXCT1-1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OXCT1-1:13
4.0 lnc-OXCT1-1:13
4.1 lnc-OXCT1-1:13
5.0 lnc-OXCT1-1:13
5.1 lnc-SELENOP-22:1
5.2 lnc-OXCT1-1:13