Transcript: lnc-OXGR1-7:4

Basic information

LNCipedia transcript ID: lnc-OXGR1-7:4 
LNCipedia gene ID: lnc-OXGR1-7
Location (hg38): chr13:96797888-96848426
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2034 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000017812.1|MICT00000097857.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -44.9712 non-coding 
CPAT coding probability 0.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OXGR1-7:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-OXGR1-7:4
5.0 lnc-OXGR1-7:4
5.1 lnc-IRS2-70:3
5.2 lnc-OXGR1-7:4