Transcript: lnc-OXGR1-8:2

Basic information

LNCipedia transcript ID: lnc-OXGR1-8:2 
LNCipedia gene ID: lnc-OXGR1-8
Location (hg38): chr13:96941429-96984172
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 586 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016
Alternative transcript names: ENST00000606237.1
Alternative gene names: ENSG00000243300.2; LINC00359;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -83.5442 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OXGR1-8:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OXGR1-1:2
4.0 LINC00359:2
4.1 LINC00359:2
5.0 LINC00359:2
5.1 lnc-IRS2-69:2
5.2 lnc-OXGR1-8:2