Transcript: lnc-P2RY1-3:3

Basic information

LNCipedia transcript ID: lnc-P2RY1-3:3 
LNCipedia gene ID: lnc-P2RY1-3
Location (hg38): chr3:152650474-152678783
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 777 bp
Exons: 4
Sources: Broad Institute
Alternative transcript names: TCONS_00006277
Alternative gene names: XLOC_002878; linc-P2RY1-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.9092 non-coding 
CPAT coding probability 4.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-P2RY1-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-P2RY1-3:5
3.1 lnc-P2RY1-3:3
4.0 lnc-P2RY1-3:3
4.1 lnc-P2RY1-3:3
5.0 lnc-P2RY1-3:3
5.1 lnc-SELENOT-33:7
5.2 lnc-P2RY1-3:3