Transcript: lnc-P2RY1-3:9

Basic information

LNCipedia transcript ID: lnc-P2RY1-3:9 
LNCipedia gene ID: lnc-P2RY1-3
Ensembl Gene ID: ENSG00000244545
Ensembl Transcript ID: ENST00000496084
Location (hg38): chr3:152648146-152650447
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 487 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00005625; ENST00000496084; ENST00000496084.1; RP11-788A4.1-001; OTTHUMT00000356947.1; NONHSAT092760
Alternative gene names: XLOC_002877; linc-P2RY1-3; ENSG00000244545; RP11-788A4.1; ENSG00000244545.1; OTTHUMG00000159698.1; AC092924.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -319.3075 non-coding 
CPAT coding probability 0.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-P2RY1-3:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MBNL1-2:1
3.1 lnc-MBNL1-2:1
4.0 lnc-P2RY1-3:9
4.1 lnc-P2RY1-3:9
5.0 lnc-P2RY1-3:9
5.1 lnc-SELENOT-33:1
5.2 lnc-P2RY1-3:9