Transcript: lnc-P2RY2-1:1

Basic information

LNCipedia transcript ID: lnc-P2RY2-1:1 
LNCipedia gene ID: lnc-P2RY2-1
Ensembl Gene ID: ENSG00000260401
Ensembl Transcript ID: ENST00000565433
Location (hg38): chr11:73238975-73242335
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3361 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000565433.1; RP11-800A3.4-001; OTTHUMT00000397338.1; NONHSAT022816
Alternative gene names: ENSG00000260401.1; RP11-800A3.4; OTTHUMG00000167967.1; AP002761.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.9067 non-coding 
CPAT coding probability 8.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-P2RY2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-P2RY2-1:1
4.0 lnc-P2RY2-1:1
4.1 lnc-P2RY2-1:1
5.0 lnc-P2RY2-1:1
5.1 lnc-TCIRG1-115:1
5.2 lnc-P2RY2-1:1