Transcript: lnc-PABPC1L-4:1

Basic information

LNCipedia transcript ID: lnc-PABPC1L-4:1 
LNCipedia gene ID: lnc-PABPC1L-4
Location (hg38): chr20:44960514-44961922
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 897 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000053334.1|MICT00000218427.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -38.7418 non-coding 
CPAT coding probability 0.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PABPC1L-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PABPC1L-4:1
5.0 lnc-PABPC1L-4:1
5.1 lnc-STK4-4:1
5.2 lnc-PABPC1L-4:1