Transcript: lnc-PABPC4-1:16

Basic information

LNCipedia transcript ID: lnc-PABPC4-1:16 
LNCipedia gene ID: lnc-PABPC4-1
Location (hg38): chr1:39524593-39525799
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 566 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT002569
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 41.9536 non-coding 
CPAT coding probability 1.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PABPC4-1:16 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PABPC4-1:16
4.0 lnc-PABPC4-1:16
4.1 lnc-PABPC4-1:16
5.0 lnc-PABPC4-1:16
5.1 lnc-PABPC4-1:16
5.2 lnc-PABPC4-1:16