Transcript: lnc-PABPC4L-21:7

Basic information

LNCipedia transcript ID: lnc-PABPC4L-21:7 
LNCipedia gene ID: lnc-PABPC4L-21
Location (hg38): chr4:131951313-131976181
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 750 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000251555.1|FTMT21300028117.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.3971 non-coding 
CPAT coding probability 0.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PABPC4L-21:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-62N21.1.1-2:9
5.0 lnc-RP11-62N21.1.1-2:9
5.1 lnc-CLGN-68:7
5.2 lnc-PABPC4L-21:7