Transcript: lnc-PABPC4L-5:2

Basic information

LNCipedia transcript ID: lnc-PABPC4L-5:2 
LNCipedia gene ID: lnc-PABPC4L-5
Location (hg38): chr4:133093861-133149116
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2822 bp
Exons: 9
Sources: Refseq - Dec 2014
Alternative transcript names: NR_125885
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.8331 non-coding 
CPAT coding probability 0.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PABPC4L-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-62N21.1.1-5:5
4.0 lnc-RP11-62N21.1.1-5:5
4.1 lnc-RP11-62N21.1.1-5:5
5.0 lnc-RP11-62N21.1.1-5:5
5.1 lnc-CLGN-61:2
5.2 lnc-PABPC4L-5:2