Transcript: lnc-PABPC4L-5:9

Basic information

LNCipedia transcript ID: lnc-PABPC4L-5:9 
LNCipedia gene ID: lnc-PABPC4L-5
Location (hg38): chr4:133094037-133149113
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2934 bp
Exons: 11
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000250241.1|ENCT00000336178.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.8331 non-coding 
CPAT coding probability 6.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PABPC4L-5:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-62N21.1.1-5:11
5.0 lnc-RP11-62N21.1.1-5:11
5.1 lnc-CLGN-61:9
5.2 lnc-PABPC4L-5:9