Transcript: lnc-PALM2-AKAP2-1:2

Basic information

LNCipedia transcript ID: lnc-PALM2-AKAP2-1:2 
LNCipedia gene ID: lnc-PALM2-AKAP2-1
Location (hg38): chr9:110338011-110338619
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 322 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016129; NONHSAT133963
Alternative gene names: XLOC_007516; linc-MUSK-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -267.5145 non-coding 
CPAT coding probability 2.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PALM2-AKAP2-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PALM2-AKAP2-1:1
3.1 lnc-PALM2-AKAP2-1:1
4.0 lnc-AKAP2-1:1
4.1 lnc-AKAP2-1:1
5.0 lnc-AKAP2-1:1
5.1 lnc-PRPF4-75:1
5.2 lnc-PALM2-AKAP2-1:2