Transcript: lnc-PANK1-2:17

Basic information

LNCipedia transcript ID: lnc-PANK1-2:17 
LNCipedia gene ID: lnc-PANK1-2
Location (hg38): chr10:89681280-89687908
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3662 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_346_NR_026835
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 26.1709 non-coding 
CPAT coding probability 2.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PANK1-2:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PANK1-5:1
4.0 lnc-PANK1-5:1
4.1 lnc-PANK1-2:17
5.0 lnc-PANK1-2:17
5.1 lnc-HTR7-17:17
5.2 lnc-PANK1-2:17