Transcript: lnc-PANO1-1:4

Basic information

LNCipedia transcript ID: lnc-PANO1-1:4 
LNCipedia gene ID: lnc-PANO1-1
Location (hg38): chr11:777578-784284
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 873 bp
Exons: 2
Sources: Refseq - Dec 2014
Alternative transcript names: NR_126343
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -79.1057 non-coding 
CPAT coding probability 19.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PANO1-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TALDO1-1:8
4.0 lnc-AP006621.5.1-1:5
4.1 lnc-AP006621.5.1-1:5
5.0 lnc-AP006621.5.1-1:5
5.1 lnc-OR51M1-112:4
5.2 lnc-PANO1-1:4