Transcript: lnc-PANO1-1:6

Basic information

LNCipedia transcript ID: lnc-PANO1-1:6 
LNCipedia gene ID: lnc-PANO1-1
RefSeq ID: NR_126342
Location (hg38): chr11:777578-784297
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 640 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126342.1
Alternative gene names: LOC171391


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -92.8088 non-coding 
CPAT coding probability 2.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PANO1-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-OR51M1-112:6
5.1 lnc-OR51M1-112:6
5.2 lnc-PANO1-1:6