Transcript: lnc-PANO1-1:8

Basic information

LNCipedia transcript ID: lnc-PANO1-1:8 
LNCipedia gene ID: lnc-PANO1-1
Ensembl Gene ID: ENSG00000255284
Ensembl Transcript ID: ENST00000525941
Location (hg38): chr11:777608-784297
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 610 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT017319; ENST00000525941.1
Alternative gene names: ENSG00000255284.1; AP006621.5; AP006621.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -92.8088 non-coding 
CPAT coding probability 4.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PANO1-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TALDO1-1:4
4.0 lnc-AP006621.5.1-1:8
4.1 lnc-AP006621.5.1-1:8
5.0 lnc-AP006621.5.1-1:8
5.1 lnc-OR51M1-112:8
5.2 lnc-PANO1-1:8