Transcript: lnc-PANO1-1:9

Basic information

LNCipedia transcript ID: lnc-PANO1-1:9 
LNCipedia gene ID: lnc-PANO1-1
Location (hg38): chr11:779454-780755
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1302 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT017320; NR_046316
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -21.3567 non-coding 
CPAT coding probability 46.91% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PANO1-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TALDO1-1:5
4.0 lnc-AP006621.5.1-1:9
4.1 lnc-AP006621.5.1-1:9
5.0 lnc-AP006621.5.1-1:9
5.1 lnc-OR51M1-112:9
5.2 lnc-PANO1-1:9