Transcript: lnc-PAQR3-1:2

Basic information

LNCipedia transcript ID: lnc-PAQR3-1:2 
LNCipedia gene ID: lnc-PAQR3-1
Location (hg38): chr4:78768483-78775900
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 765 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT097083
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.9034 non-coding 
CPAT coding probability 20.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PAQR3-1:2 no no no no

Available literature

  1. Bannon (2015), Identification of long noncoding RNAs dysregulated in the midbrain of human cocaine abusers., J. Neurochem.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PAQR3-1:2
4.0 lnc-PAQR3-1:2
4.1 lnc-PAQR3-1:2
5.0 lnc-PAQR3-1:2
5.1 lnc-PAQR3-1:2
5.2 lnc-PAQR3-1:2