Transcript: lnc-PAQR9-2:1

Basic information

LNCipedia transcript ID: lnc-PAQR9-2:1 
LNCipedia gene ID: lnc-PAQR9-2
Ensembl Gene ID: ENSG00000268129
Ensembl Transcript ID: ENST00000597953
Location (hg38): chr3:143000907-143001467
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 561 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000597953.1
Alternative gene names: ENSG00000268129.1; RP11-91G21.1; AC026304.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -262.8651 non-coding 
CPAT coding probability 3.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PAQR9-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PAQR9-2:1
4.0 lnc-PAQR9-2:1
4.1 lnc-PAQR9-2:1
5.0 lnc-PAQR9-2:1
5.1 lnc-GK5-13:2
5.2 lnc-PAQR9-2:1