Transcript: lnc-PARN-7:1

Basic information

LNCipedia transcript ID: lnc-PARN-7:1 
LNCipedia gene ID: lnc-PARN-7
Ensembl Gene ID: ENSG00000262732
Ensembl Transcript ID: ENST00000570663
Location (hg38): chr16:13930677-13935635
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 396 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000570663.1; CTD-2135D7.2-001; OTTHUMT00000436614.1; NONHSAT140657
Alternative gene names: ENSG00000262732.1; CTD-2135D7.2; OTTHUMG00000177375.1; AC010401.2; AC010401.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 91.9421 coding 
CPAT coding probability 1.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PARN-7:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PARN-7:1
4.0 lnc-PARN-7:1
4.1 lnc-PARN-7:1
5.0 lnc-PARN-7:1
5.1 lnc-PARN-7:1
5.2 lnc-PARN-7:1